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Species belonging to selected taxon:

Homo sapiens



ABOUT THIS RECORD

ID: MNEST007985
species: Homo sapiens
miRNA family: mir-198
source: miRNEST

Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGTCCAGAGGGGAGATAGG

miRNA*
TTCTTCTCTATAGAATAA

mismatches: 4
bulges: 1

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pre-miRNA
CATTGGTCCAGAGGGGAGATAGGTTCCTGTGATTTTTCCTTCTTCTCTATAGAATAAA

dot-bracket secondary structure
..(((.((...((((((((.(((.((....)).....)))))))))))...)).))).


SIMILARITIES
miRBase ggo-mir-198: 3e-27

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-198: 3e-21
most similar mature miRNAs

Identical with: ggo-mir-198 from miRBase (MNEST028325)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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